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STRINGSTRING
PP1S6_39V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S6_39V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S6_39V6.1Predicted protein; Belongs to the peptidase A1 family (471 aa)    
Predicted Functional Partners:
PP1S57_34V6.1
Predicted protein (656 aa)
       
 
  0.647
PP1S22_40V6.1
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family (757 aa)
     
   
  0.539
PP1S55_148V6.1
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors; Belongs to the peptidase A22A family (477 aa)
       
 
  0.539
PP1S76_209V6.1
annotation not available (937 aa)
     
 
  0.536
PP1S1362_2V6.1
Predicted protein (305 aa)
     
 
  0.533
PP1S351_33V6.2
Predicted protein (430 aa)
           
  0.523
PP1S220_60V6.1
Predicted protein (605 aa)
           
  0.522
PP1S93_186V6.1
annotation not available (691 aa)
           
  0.499
PP1S386_12V6.1
Predicted protein (567 aa)
           
  0.499
PP1S100_146V6.1
Polycomb group protein (999 aa)
           
  0.493
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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