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STRINGSTRING
PP1S70_173V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S70_173V6.1" - Protein-L-isoaspartate O-methyltransferase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S70_173V6.1Protein-L-isoaspartate O-methyltransferase (218 aa)    
Predicted Functional Partners:
PP1S409_14V6.1
Predicted protein (96 aa)
     
        0.871
PP1S242_65V6.1
Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage (173 aa)
       
      0.612
PP1S83_219V6.2
Predicted protein (75 aa)
     
      0.604
PP1S78_28V6.2
Predicted protein (288 aa)
   
   
  0.586
YKT6A2
R-SNARE, YKT6-family ; Belongs to the synaptobrevin family (156 aa)
       
      0.584
YKT6A1
R-SNARE, YKT6-family ; Belongs to the synaptobrevin family (200 aa)
       
      0.584
PP1S80_41V6.1
Alpha-galactosidase (628 aa)
     
        0.578
PP1S19_295V6.1
Alpha-galactosidase (456 aa)
     
        0.578
PP1S40_134V6.1
Predicted protein (222 aa)
     
      0.575
PP1S32_349V6.1
Predicted protein (222 aa)
     
      0.575
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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