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STRINGSTRING
PP1S70_258V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S70_258V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S70_258V6.1Predicted protein (1904 aa)    
Predicted Functional Partners:
PP1S6_173V6.1
Predicted protein; Belongs to the eukaryotic initiation factor 4E family (286 aa)
       
 
  0.922
PP1S60_180V6.1
annotation not available (80 aa)
       
 
  0.922
PP1S8_180V6.2
Predicted protein (1605 aa)
     
        0.877
PP1S127_102V6.1
Predicted protein (1156 aa)
     
        0.877
PP1S45_236V6.1
Predicted protein; Belongs to the eukaryotic initiation factor 4E family (220 aa)
       
 
  0.763
PP1S45_235V6.1
Predicted protein; Belongs to the eukaryotic initiation factor 4E family (223 aa)
       
 
  0.763
PP1S426_46V6.1
Predicted protein; Belongs to the eukaryotic initiation factor 4E family (220 aa)
       
 
  0.763
PP1S39_197V6.1
Predicted protein; Belongs to the eukaryotic initiation factor 4E family (220 aa)
       
 
  0.763
PP1S65_5V6.1
annotation not available (462 aa)
     
 
  0.760
PP1S34_207V6.1
Predicted protein (463 aa)
     
 
  0.760
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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