• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S71_166V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S71_166V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S71_166V6.1Predicted protein (327 aa)    
Predicted Functional Partners:
PP1S75_49V6.1
Predicted protein (388 aa)
   
 
  0.638
PP1S213_114V6.1
annotation not available (560 aa)
   
   
  0.617
PP1S267_85V6.1
Predicted protein (387 aa)
     
      0.609
PP1S66_7V6.1
annotation not available (480 aa)
   
   
  0.597
PP1S382_28V6.1
Predicted protein (288 aa)
         
  0.593
PP1S19_64V6.1
Predicted protein (764 aa)
   
   
  0.591
PP1S251_19V6.1
Predicted protein (557 aa)
   
   
  0.591
PP1S251_17V6.1
annotation not available (557 aa)
   
   
  0.591
PP1S165_132V6.1
Predicted protein (569 aa)
   
   
  0.591
PP1S5_400V6.1
Predicted protein (1030 aa)
   
   
  0.589
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (12%) [HD]