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STRINGSTRING
PP1S71_168V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S71_168V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S71_168V6.1Predicted protein (492 aa)    
Predicted Functional Partners:
PP1S34_360V6.1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (632 aa)
         
  0.663
PP1S25_365V6.1
Predicted protein (353 aa)
   
   
  0.660
PP1S2646_2V6.1
Predicted protein (452 aa)
         
  0.603
PP1S18_235V6.1
Predicted protein; Belongs to the MRE11/RAD32 family (716 aa)
         
  0.552
PP1S11890_1V6.1
Predicted protein; Alkaline phosphatase ; Belongs to the alkaline phosphatase family (223 aa)
         
  0.548
PP1S70_250V6.4
Predicted protein (317 aa)
         
  0.535
PP1S143_123V6.1
Predicted protein (314 aa)
         
  0.535
PP1S2891_1V6.1
Predicted protein (187 aa)
         
  0.532
PP1S105_45V6.1
Predicted protein (590 aa)
           
  0.530
PP1S5942_1V6.1
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (108 aa)
         
  0.516
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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