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STRINGSTRING
PP1S71_244V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S71_244V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S71_244V6.2Predicted protein (796 aa)    
Predicted Functional Partners:
PP1S143_175V6.1
Peptidyl-prolyl cis-trans isomerase (220 aa)
     
 
  0.916
PP1S89_87V6.1
Predicted protein (473 aa)
     
   
  0.895
PP1S66_107V6.1
Predicted protein (475 aa)
     
   
  0.895
PP1S6_407V6.1
Translation factor GUF1 homolog, chloroplastic; Promotes chloroplast protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one- codon backward translocation of tRNAs on improperly translocated ribosomes (735 aa)
     
        0.885
PP1S263_35V6.1
Predicted protein (421 aa)
     
        0.874
HTA1511
Histone H2A (140 aa)
     
 
  0.865
HTA1505
Histone H2A (140 aa)
     
 
  0.865
HTA1507
Histone H2A (139 aa)
     
 
  0.865
PP1S55_140V6.1
Predicted protein (412 aa)
     
        0.865
PP1S245_2V6.1
Predicted protein (338 aa)
     
        0.861
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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