STRINGSTRING
PP1S71_267V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S71_267V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S71_267V6.1Annotation not available (1107 aa)    
Predicted Functional Partners:
CPC1504
Condensin complex component SMC2 (1196 aa)
     
  0.999
CPC1501
Condensin complex component SMC4 (1258 aa)
     
  0.998
CPD1502
Chromosome condensation complex protein (1623 aa)
     
  0.997
CPD1501
Chromosome condensation complex protein (1668 aa)
     
  0.997
PP1S31_201V6.1
Annotation not available (688 aa)
     
  0.996
PP1S207_21V6.1
Annotation not available (664 aa)
     
  0.996
PP1S6_143V6.1
Predicted protein (1035 aa)
     
      0.991
PP1S65_79V6.1
KINID1b (1197 aa)
     
      0.991
PP1S34_181V6.1
KINID1a (1236 aa)
     
      0.991
PP1S315_14V6.1
Predicted protein (1012 aa)
     
      0.991
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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