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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S725_2V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S725_2V6.1" - Alpha-mannosidase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S725_2V6.1Alpha-mannosidase (633 aa)    
Predicted Functional Partners:
PP1S11_175V6.1
Predicted protein (754 aa)
     
   
  0.947
PP1S336_16V6.2
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family (597 aa)
   
   
  0.889
PP1S7366_1V6.1
Predicted protein (409 aa)
   
        0.885
PP1S47_221V6.1
Predicted protein (208 aa)
     
        0.882
PP1S2121_1V6.1
Predicted protein (133 aa)
     
        0.882
PP1S77_136V6.1
annotation not available (1012 aa)
     
 
0.853
PP1S129_147V6.1
annotation not available (1047 aa)
     
 
0.853
PP1S337_39V6.2
Predicted protein (723 aa)
     
   
  0.842
PP1S367_3V6.1
Predicted protein (246 aa)
       
      0.805
PP1S2626_1V6.1
Predicted protein (313 aa)
 
            0.786
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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