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STRINGSTRING
PP1S72_106V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S72_106V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S72_106V6.1Predicted protein; Belongs to the protein kinase superfamily (541 aa)    
Predicted Functional Partners:
PP1S39_142V6.1
Predicted protein; Belongs to the CRISP family (170 aa)
           
  0.613
PP1S57_136V6.1
Predicted protein (442 aa)
           
  0.554
PP1S310_2V6.1
Predicted protein (402 aa)
           
  0.554
PP1S381_1V6.1
Predicted protein (434 aa)
           
  0.499
PP1S288_14V6.1
Predicted protein (385 aa)
           
  0.499
PP1S191_128V6.1
Predicted protein (395 aa)
           
  0.499
PP1S87_157V6.2
Mitogen-activated protein kinase (533 aa)
   
 
 
  0.488
PP1S80_71V6.2
Mitogen-activated protein kinase (532 aa)
   
 
 
  0.488
PP1S149_39V6.3
Mitogen-activated protein kinase (375 aa)
   
 
 
  0.488
PP1S207_63V6.1
Mitogen-activated protein kinase (368 aa)
   
 
 
  0.483
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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