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PP1S72_25V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S72_25V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S72_25V6.1Predicted protein (751 aa)    
Predicted Functional Partners:
PP1S159_68V6.3
Predicted protein (438 aa)
 
  0.976
PP1S291_43V6.1
Predicted protein (408 aa)
 
  0.966
PP1S429_29V6.1
Predicted protein (396 aa)
   
 
  0.959
PP1S41_162V6.1
Predicted protein (394 aa)
   
 
  0.959
PP1S169_158V6.1
Predicted protein (690 aa)
   
 
  0.959
PP1S3719_1V6.1
Predicted protein (254 aa)
       
  0.950
PP1S177_61V6.1
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway (320 aa)
   
 
  0.925
PP1S323_86V6.1
annotation not available (304 aa)
   
  0.918
PP1S3_460V6.1
Ribulose-phosphate 3-epimerase ; Belongs to the ribulose-phosphate 3-epimerase family (237 aa)
   
  0.898
PP1S3_334V6.1
Predicted protein; Triosephosphate isomerase (253 aa)
   
  0.889
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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