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STRINGSTRING
PP1S73_61V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S73_61V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S73_61V6.1Predicted protein (1141 aa)    
Predicted Functional Partners:
PP1S160_127V6.1
Predicted protein (421 aa)
           
  0.675
PP1S15_227V6.1
Predicted protein (410 aa)
     
 
  0.625
PP1S13_123V6.1
Predicted protein (265 aa)
           
  0.567
PP1S18_223V6.1
Predicted protein (211 aa)
     
   
  0.560
PP1S87_154V6.1
annotation not available (734 aa)
           
  0.524
PP1S372_25V6.1
Predicted protein (358 aa)
     
 
  0.501
PP1S40_20V6.1
Predicted protein (478 aa)
     
   
  0.454
COQ6
Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3- polyprenyl-4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6 (485 aa)
     
 
  0.448
PP1S256_50V6.1
Predicted protein (708 aa)
     
 
  0.448
PP1S191_78V6.1
annotation not available (575 aa)
     
   
  0.447
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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