STRINGSTRING
PP1S73_64V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S73_64V6.1" - DNA-directed RNA polymerase subunit in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S73_64V6.1DNA-directed RNA polymerase subunit (162 aa)    
Predicted Functional Partners:
PP1S74_182V6.1
Predicted protein (122 aa)
   
  0.999
PP1S221_55V6.1
Annotation not available (467 aa)
      
  0.997
PP1S30_177V6.1
Predicted protein (147 aa)
      
  0.992
PP1S431_4V6.1
Predicted protein (232 aa)
      
        0.991
PP1S138_84V6.2
Predicted protein (240 aa)
      
        0.991
PP1S104_30V6.1
Predicted protein; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (186 aa)
      
        0.991
PP1S169_104V6.1
Predicted protein (360 aa)
      
  0.990
PP1S197_12V6.1
Predicted protein (145 aa)
      
  0.990
PP1S169_131V6.1
DNA-directed RNA polymerase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1200 aa)
      
  0.988
PP1S338_40V6.1
Annotation not available (1716 aa)
      
  0.988
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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