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STRINGSTRING
PP1S74_182V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S74_182V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S74_182V6.1Predicted protein (122 aa)    
Predicted Functional Partners:
PP1S169_104V6.1
Predicted protein (360 aa)
   
 
  0.999
PP1S30_177V6.1
Uncharacterized protein (147 aa)
     
 
  0.999
PP1S111_158V6.1
Predicted protein (73 aa)
     
 
  0.998
PP1S66_116V6.1
annotation not available (266 aa)
     
 
  0.998
PP1S2_670V6.1
Predicted protein (189 aa)
     
 
  0.998
PP1S12_286V6.1
DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs (282 aa)
     
 
  0.998
PP1S169_131V6.1
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1200 aa)
   
 
  0.998
PP1S73_64V6.1
DNA-directed RNA polymerase subunit (162 aa)
   
 
  0.998
PP1S197_12V6.1
Predicted protein (145 aa)
     
 
  0.997
PP1S194_21V6.1
annotation not available (559 aa)
     
 
  0.997
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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