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STRINGSTRING
PP1S74_183V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S74_183V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S74_183V6.1Predicted protein (489 aa)    
Predicted Functional Partners:
PP1S12_187V6.1
Predicted protein (287 aa)
   
   
  0.612
GCP1
Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance (476 aa)
   
   
  0.588
PP1S36_219V6.1
Predicted protein (510 aa)
     
   
  0.529
PP1S25_162V6.1
Predicted protein (482 aa)
   
   
  0.527
PP1S3_466V6.1
annotation not available (781 aa)
     
   
  0.524
PP1S227_57V6.2
annotation not available (792 aa)
     
   
  0.524
PP1S76_15V6.1
Predicted protein (397 aa)
     
   
  0.523
PP1S281_127V6.1
Predicted protein (310 aa)
     
        0.523
PP1S249_66V6.1
Predicted protein (152 aa)
           
  0.522
PP1S54_181V6.1
Predicted protein (291 aa)
     
   
  0.521
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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