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STRINGSTRING
PP1S74_215V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S74_215V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S74_215V6.1Predicted protein (503 aa)    
Predicted Functional Partners:
PP1S641_1V6.1
Predicted protein (807 aa)
     
      0.919
PP1S70_135V6.1
Predicted protein (486 aa)
     
      0.849
PP1S66_16V6.1
Predicted protein (376 aa)
   
   
  0.706
PP1S5_84V6.1
Predicted protein (361 aa)
   
   
  0.706
PP1S213_28V6.1
Predicted protein (323 aa)
   
   
  0.688
PP1S150_94V6.2
annotation not available (987 aa)
         
  0.675
PP1S191_78V6.1
annotation not available (575 aa)
   
   
  0.645
GCP1
Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance (476 aa)
         
  0.637
GCP2
Probable tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity (339 aa)
         
  0.637
PP1S169_145V6.1
Predicted protein (703 aa)
           
  0.632
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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