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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PpLFY2 protein (Physcomitrella patens) - STRING interaction network
"PpLFY2" - FLORICAULA/LEAFY homolog 2 in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PpLFY2FLORICAULA/LEAFY homolog 2; Predicted protein (349 aa)    
Predicted Functional Partners:
PP1S67_164V6.1
Predicted protein (370 aa)
       
 
  0.858
PP1S198_16V6.1
Predicted protein (371 aa)
       
 
  0.858
PP1S149_38V6.1
Predicted protein (402 aa)
       
 
  0.858
PP1S126_8V6.1
Predicted protein (392 aa)
       
 
  0.858
PP1S298_61V6.1
Predicted protein (428 aa)
       
 
  0.817
PP1S351_7V6.1
annotation not available (578 aa)
           
  0.695
MKN2
KNOX class 1 protein MKN2 (445 aa)
     
   
  0.685
MKN5
KNOX class 1 protein MKN5 (508 aa)
     
   
  0.685
MKN4
KNOX class 1 protein, MKN4 (258 aa)
           
  0.685
PP1S130_5V6.1
Predicted protein (881 aa)
           
  0.685
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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