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STRINGSTRING
PP1S74_56V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S74_56V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S74_56V6.1Predicted protein (317 aa)    
Predicted Functional Partners:
PP1S1_515V6.1
Tyrosine--tRNA ligase (502 aa)
           
  0.761
PP1S195_27V6.1
Predicted protein (198 aa)
   
     
  0.633
Bit1
Uncharacterized protein (195 aa)
   
     
  0.604
PP1S131_196V6.1
Predicted protein (174 aa)
   
     
  0.604
PP1S76_66V6.1
Predicted protein (633 aa)
           
  0.554
PP1S200_41V6.1
Predicted protein (607 aa)
           
  0.554
PP1S64_186V6.1
annotation not available (158 aa)
           
  0.521
PP1S64_185V6.1
annotation not available (111 aa)
           
  0.521
PP1S14_251V6.1
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family (388 aa)
           
  0.521
PP1S64_89V6.1
annotation not available (232 aa)
         
  0.518
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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