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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S75_166V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S75_166V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S75_166V6.1Predicted protein (177 aa)    
Predicted Functional Partners:
PP1S65_2V6.3
Predicted protein (357 aa)
     
 
  0.835
PP1S16_267V6.1
annotation not available (520 aa)
     
 
  0.835
PP1S149_129V6.1
Predicted protein (174 aa)
     
 
  0.823
PP1S312_10V6.1
Predicted protein (572 aa)
           
  0.638
PP1S111_8V6.1
Predicted protein (579 aa)
           
  0.638
PP1S43_239V6.2
annotation not available (447 aa)
     
 
  0.604
PP1S43_236V6.1
annotation not available (737 aa)
     
 
  0.604
PP1S373_25V6.1
annotation not available (694 aa)
     
 
  0.604
PP1S2_47V6.1
Predicted protein (124 aa)
     
 
  0.604
PP1S165_65V6.3
annotation not available (446 aa)
     
 
  0.604
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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