• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S76_118V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S76_118V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S76_118V6.1annotation not available (199 aa)    
Predicted Functional Partners:
PP1S35_152V6.1
annotation not available (1073 aa)
       
      0.845
PP1S188_92V6.2
annotation not available (1186 aa)
       
      0.845
PP1S112_221V6.1
Predicted protein (983 aa)
       
      0.845
PP1S206_32V6.1
Predicted protein (523 aa)
           
  0.772
PP1S98_36V6.2
Predicted protein (209 aa)
           
  0.699
PP1S1_350V6.3
Uncharacterized protein (140 aa)
           
  0.696
PP1S224_78V6.1
Predicted protein (546 aa)
     
   
  0.664
PP1S217_69V6.1
annotation not available (397 aa)
     
   
  0.664
PP1S310_3V6.1
annotation not available (653 aa)
     
   
  0.624
PP1S228_30V6.1
Predicted protein (330 aa)
           
  0.614
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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