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SYP2A1 protein (Physcomitrella patens) - STRING interaction network
"SYP2A1" - Qa-SNARE, SYP2/Pep12p/Syntaxin 7-type in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYP2A1Qa-SNARE, SYP2/Pep12p/Syntaxin 7-type ; Belongs to the syntaxin family (262 aa)    
Predicted Functional Partners:
VPS33
SM/Sec1-family protein ; Belongs to the STXBP/unc-18/SEC1 family (605 aa)
     
 
  0.944
PP1S223_98V6.1
Predicted protein (837 aa)
       
 
  0.939
PP1S88_37V6.1
annotation not available (1024 aa)
     
 
  0.939
PP1S396_8V6.1
annotation not available (1069 aa)
       
 
  0.938
YKT6A2
R-SNARE, YKT6-family ; Belongs to the synaptobrevin family (156 aa)
     
 
  0.934
YKT6A1
R-SNARE, YKT6-family ; Belongs to the synaptobrevin family (200 aa)
     
 
  0.934
SEC22A2-2
R-SNARE, SEC22-family ; Belongs to the synaptobrevin family (219 aa)
     
 
  0.932
SEC22
R-SNARE, SEC22-family ; Belongs to the synaptobrevin family (219 aa)
     
 
  0.932
VTI1A4
Qb-SNARE, VTI1-family (221 aa)
     
 
  0.929
VTI1A3
Qb-SNARE, VTI1-family (220 aa)
     
 
  0.929
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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