STRINGSTRING
PP1S76_90V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S76_90V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S76_90V6.1Predicted protein (427 aa)    
Predicted Functional Partners:
PP1S2_453V6.1
Annotation not available (250 aa)
   
          0.518
PP1S20_349V6.1
Annotation not available (256 aa)
   
          0.485
PP1S59_33V6.1
Predicted protein (271 aa)
   
          0.470
PP1S410_29V6.1
Predicted protein (190 aa)
   
          0.440
PP1S131_87V6.1
Annotation not available (314 aa)
   
          0.439
PP1S37_21V6.1
Annotation not available (257 aa)
   
          0.433
PP1S24_61V6.1
Predicted protein (518 aa)
   
          0.433
PP1S1097_2V6.1
Predicted protein (401 aa)
   
          0.433
PP1S107_113V6.1
Predicted protein (294 aa)
   
          0.431
PP1S508_15V6.1
Annotation not available (150 aa)
   
          0.428
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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