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STRINGSTRING
PP1S79_115V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S79_115V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S79_115V6.1Predicted protein (625 aa)    
Predicted Functional Partners:
PP1S21_259V6.1
Peptidyl-prolyl cis-trans isomerase (112 aa)
     
 
  0.882
PP1S20_308V6.1
Predicted protein (239 aa)
       
 
  0.814
PP1S20_300V6.1
Adenosylhomocysteinase (485 aa)
       
 
  0.814
PP1S20_291V6.1
Adenosylhomocysteinase (485 aa)
       
 
  0.814
PP1S20_229V6.1
Adenosylhomocysteinase (485 aa)
       
 
  0.814
PP1S4335_1V6.1
Aspartokinase ; Belongs to the aspartokinase family (217 aa)
       
      0.638
PP1S286_35V6.2
Aspartokinase ; Belongs to the aspartokinase family (578 aa)
       
      0.638
PP1S162_64V6.1
Predicted protein; Aspartokinase (577 aa)
       
      0.638
PP1S391_30V6.1
annotation not available (182 aa)
       
 
  0.583
PP1S336_27V6.1
annotation not available (94 aa)
       
 
  0.583
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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