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STRINGSTRING
PP1S79_225V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S79_225V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S79_225V6.1Predicted protein; Belongs to the peptidase S16 family (624 aa)    
Predicted Functional Partners:
PP1S150_25V6.1
Predicted protein (158 aa)
       
      0.846
PP1S79_69V6.1
annotation not available (284 aa)
     
 
  0.827
PP1S163_100V6.1
Predicted protein (695 aa)
 
 
  0.821
PP1S98_222V6.1
Predicted protein (701 aa)
 
 
  0.819
PP1S171_84V6.1
Predicted protein (723 aa)
 
 
  0.818
PP1S7_399V6.1
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (93 aa)
       
      0.811
PP1S36_271V6.1
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (91 aa)
       
      0.811
PP1S526_5V6.1
Predicted protein (535 aa)
   
 
  0.803
PP1S2_151V6.1
annotation not available (531 aa)
   
 
  0.803
PP1S262_92V6.1
Predicted protein (315 aa)
   
 
  0.803
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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