STRINGSTRING
PP1S79_225V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S79_225V6.1" - Predicted protein in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S79_225V6.1Predicted protein (624 aa)    
Predicted Functional Partners:
PP1S340_7V6.1
Predicted protein (422 aa)
     
 
  0.919
PP1S218_133V6.1
Predicted protein (426 aa)
     
 
  0.919
PP1S150_25V6.1
Predicted protein (158 aa)
       
      0.919
PP1S98_222V6.1
Predicted protein (701 aa)
   
 
  0.900
PP1S171_84V6.1
Predicted protein (723 aa)
   
 
  0.900
PP1S163_100V6.1
Predicted protein (695 aa)
   
 
  0.900
PP1S7_290V6.1
Annotation not available (167 aa)
       
      0.880
PP1S506_5V6.1
Annotation not available (143 aa)
       
      0.880
PP1S465_14V6.1
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (249 aa)
       
      0.880
PP1S335_59V6.1
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (246 aa)
       
      0.880
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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