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STRINGSTRING
PP1S79_25V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S79_25V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S79_25V6.1annotation not available (240 aa)    
Predicted Functional Partners:
PP1S37_341V6.2
Predicted protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family (324 aa)
           
  0.619
PP1S71_87V6.1
Predicted protein (467 aa)
           
  0.595
PP1S301_33V6.2
Predicted protein (468 aa)
           
  0.595
PP1S83_93V6.1
annotation not available (950 aa)
           
  0.563
PP1S432_11V6.1
annotation not available (631 aa)
           
  0.559
PP1S18_124V6.1
annotation not available (630 aa)
           
  0.559
PP1S364_21V6.1
Predicted protein; Belongs to the sterol desaturase family (622 aa)
           
  0.554
PP1S328_48V6.1
Predicted protein; Belongs to the sterol desaturase family (624 aa)
           
  0.554
PP1S311_80V6.1
Predicted protein; Belongs to the sterol desaturase family (658 aa)
           
  0.554
PP1S167_142V6.1
Predicted protein (480 aa)
           
  0.536
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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