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STRINGSTRING
PP1S79_266V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S79_266V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S79_266V6.2Predicted protein (485 aa)    
Predicted Functional Partners:
PP1S54_181V6.1
Predicted protein (291 aa)
         
  0.900
PP1S15_442V6.1
Predicted protein (313 aa)
         
  0.900
PP1S15_441V6.1
Predicted protein (314 aa)
         
  0.900
PP1S77_124V6.1
Predicted protein (300 aa)
         
    0.800
PP1S56_196V6.1
Predicted protein (308 aa)
         
    0.800
PP1S332_42V6.2
Predicted protein; Belongs to the cytochrome P450 family (554 aa)
         
    0.800
PP1S210_68V6.1
Predicted protein (237 aa)
         
    0.800
PP1S94_4V6.1
annotation not available (238 aa)
         
  0.722
PP1S62_139V6.1
annotation not available (420 aa)
         
  0.722
PP1S150_16V6.1
Predicted protein (763 aa)
     
 
  0.719
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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