• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S79_85V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S79_85V6.1" - Ribonuclease P/MRP protein subunit POP5 in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S79_85V6.1Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5’-ends. Also a component of RNase MRP (149 aa)    
Predicted Functional Partners:
PP1S49_280V6.1
Predicted protein (429 aa)
   
  0.999
PP1S324_9V6.2
Predicted protein (268 aa)
     
  0.999
PP1S7_432V6.1
Uncharacterized protein (688 aa)
     
  0.992
PP1S7_433V6.1
annotation not available (381 aa)
     
 
  0.963
PP1S66_289V6.1
Predicted protein (157 aa)
     
   
  0.950
PP1S131_177V6.1
Predicted protein (157 aa)
     
   
  0.950
PP1S94_22V6.2
Predicted protein (265 aa)
     
 
  0.924
PP1S18_20V6.2
Predicted protein (266 aa)
     
 
  0.924
PP1S137_135V6.1
Predicted protein (240 aa)
     
 
  0.924
PP1S10_152V6.3
Predicted protein (268 aa)
     
 
  0.924
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (7%) [HD]