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STRINGSTRING
PP1S79_8V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S79_8V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S79_8V6.1Predicted protein (285 aa)    
Predicted Functional Partners:
PP1S131_195V6.1
Predicted protein (98 aa)
     
      0.803
PP1S9_474V6.2
annotation not available (433 aa)
           
  0.766
PP1S14_179V6.2
annotation not available (114 aa)
     
 
  0.736
3989061
NADH dehydrogenase subunit 7 (298 aa)
   
 
  0.734
PP1S197_21V6.1
Predicted protein (238 aa)
           
  0.721
PP1S224_39V6.1
Predicted protein; Belongs to the complex I 20 kDa subunit family (201 aa)
   
 
  0.713
PP1S104_73V6.1
Predicted protein; Belongs to the complex I 20 kDa subunit family (201 aa)
   
 
  0.713
PP1S15_384V6.1
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (174 aa)
     
 
  0.688
PP1S81_54V6.1
Predicted protein; Belongs to the peptidase M16 family (496 aa)
     
 
  0.668
PP1S236_34V6.1
Predicted protein (134 aa)
     
 
  0.629
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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