• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S7_216V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S7_216V6.1" - Long-chain-alcohol oxidase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S7_216V6.1Long-chain-alcohol oxidase; Long-chain fatty alcohol oxidase involved in the omega- oxidation pathway of lipid degradation (797 aa)    
Predicted Functional Partners:
PP1S291_38V6.1
Predicted protein (367 aa)
   
   
  0.721
PP1S34_191V6.1
Predicted protein (214 aa)
           
  0.600
PP1S172_96V6.1
DNA helicase; Belongs to the MCM family (901 aa)
           
  0.598
PP1S28_266V6.1
DNA helicase; Belongs to the MCM family (921 aa)
           
  0.584
PP1S523_9V6.1
Predicted protein (588 aa)
           
  0.548
PP1S25_113V6.1
Predicted protein (804 aa)
           
  0.548
PP1S159_144V6.1
annotation not available (662 aa)
           
  0.548
PP1S59_9V6.1
Uncharacterized protein (431 aa)
           
  0.528
PP1S36_102V6.1
Predicted protein (432 aa)
           
  0.528
PP1S145_30V6.1
Predicted protein (429 aa)
           
  0.528
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (10%) [HD]