STRINGSTRING
PP1S7_268V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S7_268V6.1" - D-tyrosyl-tRNA(Tyr) deacylase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S7_268V6.1D-tyrosyl-tRNA(Tyr) deacylase (328 aa)    
Predicted Functional Partners:
PP1S1_515V6.1
Predicted protein (502 aa)
   
   
  0.710
PP1S64_186V6.1
Annotation not available (158 aa)
   
   
  0.556
PP1S64_185V6.1
Annotation not available (111 aa)
   
   
  0.556
PP1S14_251V6.1
Predicted protein (388 aa)
   
   
  0.556
PP1S407_7V6.2
Predicted protein (482 aa)
     
      0.550
PP1S38_401V6.1
Predicted protein (496 aa)
     
      0.550
PP1S159_135V6.1
Annotation not available (1290 aa)
     
      0.550
PP1S7_442V6.1
Predicted protein (1330 aa)
         
  0.534
PP1S440_8V6.1
Predicted protein (832 aa)
         
  0.534
PP1S240_49V6.1
Predicted protein (882 aa)
         
  0.534
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (11%) [HD]