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STRINGSTRING
PP1S7_295V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S7_295V6.1" - Uncharacterized protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S7_295V6.1Uncharacterized protein (248 aa)    
Predicted Functional Partners:
PP1S31_183V6.2
Predicted protein (253 aa)
       
 
  0.907
PP1S136_129V6.1
annotation not available (61 aa)
       
 
  0.750
PP1S213_42V6.1
annotation not available (1168 aa)
           
  0.578
PP1S17_124V6.1
Predicted protein (597 aa)
           
  0.568
PP1S78_164V6.1
annotation not available (4738 aa)
           
  0.554
PP1S136_154V6.2
Predicted protein (212 aa)
           
  0.551
PP1S266_20V6.1
Predicted protein (119 aa)
           
  0.544
PP1S167_19V6.1
Predicted protein (120 aa)
           
  0.544
PP1S199_27V6.1
annotation not available (260 aa)
           
  0.529
PP1S199_104V6.3
Predicted protein (989 aa)
           
  0.529
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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