• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S7_343V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S7_343V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S7_343V6.1annotation not available (388 aa)    
Predicted Functional Partners:
PP1S79_69V6.1
annotation not available (284 aa)
   
   
  0.831
PP1S8360_1V6.1
Peptidylprolyl isomerase (283 aa)
 
     
  0.700
PP1S382_28V6.1
Predicted protein (288 aa)
 
     
  0.699
PP1S61_255V6.3
Predicted protein (571 aa)
 
     
  0.666
PP1S355_13V6.1
Predicted protein (483 aa)
         
  0.608
PP1S246_62V6.1
annotation not available (407 aa)
         
  0.608
PP1S22_38V6.1
Predicted protein (561 aa)
         
  0.597
PP1S1825_1V6.1
Predicted protein (345 aa)
         
  0.596
PP1S345_42V6.1
Predicted protein (566 aa)
   
   
  0.572
PP1S335_14V6.1
annotation not available (521 aa)
   
   
  0.572
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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