STRINGSTRING
PP1S7_370V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S7_370V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S7_370V6.1Predicted protein (235 aa)    
Predicted Functional Partners:
PGE1501
Transcriptional repressor EED/ESC/FIE (376 aa)
     
  0.851
HMTA1501
Histone H3 methyltransferase complex, subunit CPS60/ASH2/BRE2 (638 aa)
       
  0.828
PP1S10_107V6.1
Annotation not available (338 aa)
       
  0.828
SWDA1501
WD40 repeat protein, COMPASS complex protein (310 aa)
     
  0.820
PP1S70_188V6.1
Annotation not available (407 aa)
     
  0.820
PP1S143_120V6.1
Predicted protein (154 aa)
     
  0.820
PP1S28_215V6.1
Predicted protein (475 aa)
     
  0.798
HDA1509
Class II RPD3 type histone deacetylase protein (459 aa)
   
  0.792
HDA1503
Class III RPD3 type histone deacetylase protein (352 aa)
   
  0.792
HDA1504
Histone deacetylase (723 aa)
   
  0.792
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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