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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S7_388V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S7_388V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S7_388V6.1annotation not available (578 aa)    
Predicted Functional Partners:
PP1S90_210V6.1
annotation not available (616 aa)
           
  0.771
PP1S76_98V6.1
Predicted protein (406 aa)
           
  0.638
PP1S6_337V6.1
Predicted protein; Belongs to the Ca(2+)-cation antiporter (CaCA) (TC 2.A.19) family (622 aa)
           
  0.625
PP1S52_184V6.1
Predicted protein; Belongs to the Ca(2+)-cation antiporter (CaCA) (TC 2.A.19) family (609 aa)
           
  0.625
PP1S20_290V6.1
Predicted protein; Belongs to the Ca(2+)-cation antiporter (CaCA) (TC 2.A.19) family (712 aa)
           
  0.625
PP1S1_653V6.1
Uncharacterized protein; Belongs to the Ca(2+)-cation antiporter (CaCA) (TC 2.A.19) family (614 aa)
           
  0.625
PP1S334_27V6.1
Predicted protein (380 aa)
           
  0.614
PP1S59_63V6.1
Uncharacterized protein (311 aa)
           
  0.609
PP1S254_62V6.1
Predicted protein; Belongs to the Ca(2+)-cation antiporter (CaCA) (TC 2.A.19) family (699 aa)
           
  0.606
PP1S1_272V6.2
Uncharacterized protein; Belongs to the Ca(2+)-cation antiporter (CaCA) (TC 2.A.19) family (667 aa)
           
  0.606
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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