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STRINGSTRING
PP1S7_406V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S7_406V6.1" - Uncharacterized protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S7_406V6.1Uncharacterized protein; Belongs to the peptidase C1 family (347 aa)    
Predicted Functional Partners:
PP1S262_17V6.1
Predicted protein; Belongs to the cytochrome P450 family (524 aa)
           
  0.591
PP1S142_12V6.1
annotation not available (145 aa)
       
 
  0.578
PP1S215_43V6.1
Predicted protein (528 aa)
           
  0.566
PP1S1362_2V6.1
Predicted protein (305 aa)
   
 
  0.543
PP1S31_164V6.1
Cysteine protease (386 aa)
     
   
  0.541
PP1S130_263V6.1
Cysteine protease (386 aa)
     
   
  0.541
RUVBL1501
DNA helicase, TBP-interacting protein ; Belongs to the RuvB family (456 aa)
     
   
  0.531
PP1S40_80V6.1
annotation not available (146 aa)
     
   
  0.531
PP1S173_19V6.1
Uncharacterized protein; Belongs to the peptidase C2 family (2172 aa)
           
  0.531
PP1S141_10V6.1
annotation not available (548 aa)
           
  0.526
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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