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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S7_49V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S7_49V6.2" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S7_49V6.2annotation not available (778 aa)    
Predicted Functional Partners:
PP1S357_50V6.2
Predicted protein (300 aa)
           
  0.887
PP1S641_1V6.1
Predicted protein (807 aa)
     
 
  0.872
PP1S42_258V6.1
Predicted protein (397 aa)
           
  0.786
PP1S86_218V6.2
Predicted protein (628 aa)
           
  0.772
PP1S39_285V6.2
Predicted protein (662 aa)
           
  0.772
PP1S427_3V6.1
annotation not available (613 aa)
           
  0.761
PP1S68_181V6.1
Predicted protein (128 aa)
           
  0.707
CHR1510
SNF2 family DNA-dependent ATPase (1281 aa)
     
 
  0.702
PP1S224_38V6.1
Predicted protein (991 aa)
     
   
  0.672
PP1S14_321V6.1
Predicted protein (347 aa)
       
      0.637
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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