• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S7_73V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S7_73V6.1" - Uncharacterized protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S7_73V6.1Uncharacterized protein; Belongs to the spermidine/spermine synthase family (341 aa)    
Predicted Functional Partners:
PP1S19_29V6.1
Predicted protein (296 aa)
       
  0.973
PP1S335_22V6.1
S-adenosylmethionine decarboxylase proenzyme (391 aa)
   
 
  0.961
PP1S29_234V6.1
Predicted protein (454 aa)
   
 
  0.961
PP1S206_92V6.1
Predicted protein (475 aa)
   
 
  0.961
PP1S187_30V6.1
S-adenosylmethionine decarboxylase proenzyme (391 aa)
   
 
  0.961
PP1S1_661V6.3
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 Methylthioribulose-1-phosphate dehydratase Enolase-phosphatase E1; In the C-terminal section; belongs to the HAD-like hydrolase superfamily. MasA/MtnC family (505 aa)
 
 
  0.924
PP1S24_237V6.2
Predicted protein (485 aa)
     
  0.921
ACL1
ACL1 AtACS-like ACC synthase (461 aa)
       
  0.909
PP1S257_12V6.1
Predicted protein (265 aa)
         
    0.900
PP1S255_66V6.1
Predicted protein (255 aa)
         
    0.900
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (10%) [HD]