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STRINGSTRING
PP1S80_118V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S80_118V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S80_118V6.1Predicted protein (174 aa)    
Predicted Functional Partners:
PP1S84_121V6.2
Predicted protein (285 aa)
     
        0.885
PP1S80_110V6.1
Predicted protein; Belongs to the universal ribosomal protein uL13 family (208 aa)
     
        0.885
PP1S75_223V6.1
Predicted protein; Belongs to the universal ribosomal protein uL13 family (208 aa)
     
        0.885
PP1S6_196V6.1
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family (268 aa)
     
        0.885
PP1S63_162V6.1
Predicted protein; Belongs to the universal ribosomal protein uL13 family (208 aa)
     
        0.885
PP1S3_459V6.1
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family (273 aa)
     
        0.885
PP1S36_321V6.1
Predicted protein (275 aa)
     
        0.885
PP1S307_63V6.1
Predicted protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (528 aa)
     
        0.885
PP1S28_170V6.1
Uncharacterized protein (85 aa)
     
        0.885
ARP1507
Actin related protein Arp2 subunit ; Belongs to the actin family (391 aa)
     
        0.885
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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