STRINGSTRING
PP1S80_144V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S80_144V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S80_144V6.1Predicted protein (488 aa)    
Predicted Functional Partners:
PP1S88_186V6.1
Predicted protein (1189 aa)
   
 
  0.960
PP1S81_123V6.1
Predicted protein (1194 aa)
   
 
  0.960
PP1S505_16V6.1
Predicted protein (229 aa)
       
 
  0.913
PP1S177_85V6.1
Predicted protein (239 aa)
       
 
  0.913
PP1S70_135V6.1
Predicted protein (486 aa)
       
 
  0.730
PP1S60_201V6.1
annotation not available (458 aa)
   
 
0.722
PP1S6_158V6.2
annotation not available (463 aa)
   
 
0.721
PP1S83_80V6.1
Predicted protein (701 aa)
     
 
  0.691
PP1S314_13V6.1
annotation not available (109 aa)
     
 
  0.691
PP1S291_62V6.1
Predicted protein (704 aa)
     
 
  0.691
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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