• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S80_34V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S80_34V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S80_34V6.1annotation not available (847 aa)    
Predicted Functional Partners:
PP1S85_35V6.1
annotation not available (353 aa)
       
 
  0.982
PP1S224_52V6.1
Predicted protein (296 aa)
       
 
  0.982
PP1S106_32V6.1
annotation not available (549 aa)
           
  0.935
PP1S189_64V6.1
Predicted protein (449 aa)
     
 
  0.916
PP1S94_64V6.1
annotation not available (108 aa)
     
 
  0.908
PP1S141_10V6.1
annotation not available (548 aa)
     
 
  0.908
PP1S150_94V6.2
annotation not available (987 aa)
   
 
  0.891
PP1S3931_3V6.1
annotation not available (271 aa)
   
 
  0.884
PP1S223_54V6.1
DNA ligase (776 aa)
   
 
  0.884
PP1S313_13V6.1
annotation not available (622 aa)
   
 
  0.883
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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