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STRINGSTRING
PP1S8174_1V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S8174_1V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S8174_1V6.1Predicted protein (379 aa)    
Predicted Functional Partners:
PBP
annotation not available (656 aa)
   
 
  0.954
MurE
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (606 aa)
   
  0.939
PP1S101_215V6.1
Predicted protein; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (822 aa)
   
  0.815
PP1S8097_1V6.1
Predicted protein (345 aa)
 
   
  0.790
PP1S10201_1V6.1
Predicted protein (345 aa)
 
   
  0.760
PP1S66_7V6.1
annotation not available (480 aa)
   
   
  0.736
PP1S1_376V6.1
Uncharacterized protein (363 aa)
   
 
  0.728
PP1S210_66V6.1
annotation not available (615 aa)
   
 
  0.727
PP1S89_236V6.1
Predicted protein (382 aa)
   
   
  0.723
MurD
UDP-N-acetylmuramoylalanine-D-glutamate ligase (521 aa)
   
   
  0.699
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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