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STRINGSTRING
PP1S81_169V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S81_169V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S81_169V6.1Predicted protein (355 aa)    
Predicted Functional Partners:
CHR1502
annotation not available (1442 aa)
           
  0.625
CHR1514
annotation not available (2967 aa)
     
   
  0.571
CHR1503
annotation not available (3092 aa)
     
   
  0.571
CHR1520
SWI/SNF class chromatin remodeling complex protein (2426 aa)
           
  0.570
CHR1534
SWI/SNF class chromatin remodeling complex protein (2428 aa)
           
  0.570
PP1S181_40V6.1
annotation not available (816 aa)
           
  0.545
PP1S3_639V6.1
Predicted protein (1234 aa)
     
   
  0.532
CHR1528
SNF2 family DNA-dependent ATPase (1260 aa)
     
   
  0.532
CHR1529
Chromatin-remodeling complex ATPase; SNF2 family DNA-dependent ATPase (1049 aa)
           
  0.526
CHR1527
Chromatin-remodeling complex ATPase; SNF2 family DNA-dependent ATPase (1047 aa)
           
  0.526
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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