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STRINGSTRING
PP1S81_78V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S81_78V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S81_78V6.1Predicted protein (455 aa)    
Predicted Functional Partners:
PP1S270_57V6.1
Predicted protein (296 aa)
   
   
  0.908
PP1S4_362V6.1
Predicted protein (683 aa)
     
        0.885
PP1S129_193V6.1
Predicted protein (687 aa)
     
        0.885
PP1S190_104V6.1
Predicted protein (291 aa)
     
        0.874
PP1S190_86V6.1
Predicted protein (431 aa)
     
        0.873
PP1S10947_1V6.1
annotation not available (303 aa)
     
        0.873
PP1S66_287V6.1
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX; Belongs to the Mg-chelatase subunits D/I family (779 aa)
     
        0.866
PP1S71_89V6.1
Predicted protein (143 aa)
     
        0.862
PP1S301_31V6.2
Predicted protein (173 aa)
     
        0.862
PP1S9_141V6.1
annotation not available (1040 aa)
     
        0.859
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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