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STRINGSTRING
PP1S83_104V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S83_104V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S83_104V6.1Predicted protein (297 aa)    
Predicted Functional Partners:
PP1S49_167V6.1
Predicted protein (372 aa)
         
  0.955
PP1S192_73V6.1
Predicted protein (293 aa)
     
 
  0.948
PP1S40_202V6.1
Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the conversion of glucosylceramide to free glucose and ceramide (1129 aa)
     
 
  0.903
PP1S222_40V6.1
Predicted protein; Belongs to the sterol desaturase family (256 aa)
     
  0.892
PP1S7_231V6.2
Uncharacterized protein (726 aa)
     
 
  0.878
PP1S48_58V6.4
annotation not available (762 aa)
     
 
  0.878
PP1S71_314V6.2
Predicted protein (380 aa)
     
 
  0.822
PP1S32_36V6.1
Predicted protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family (335 aa)
     
 
  0.822
PP1S18_151V6.1
Predicted protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family (334 aa)
     
 
  0.822
PP1S10_1V6.1
Predicted protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family (334 aa)
     
 
  0.822
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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