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PP1S83_144V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S83_144V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S83_144V6.1Predicted protein (969 aa)    
Predicted Functional Partners:
PP1S132_95V6.1
Aspartate aminotransferase (447 aa)
         
  0.936
PP1S60_266V6.1
Predicted protein (666 aa)
     
 
  0.899
PP1S1_815V6.1
Uncharacterized protein (664 aa)
     
 
  0.899
PP1S159_52V6.1
Predicted protein (664 aa)
     
 
  0.899
PP1S133_10V6.1
Predicted protein (668 aa)
     
 
  0.899
PP1S40_9V6.1
Malate synthase ; Belongs to the malate synthase family (559 aa)
       
  0.899
PP1S106_16V6.2
Formate dehydrogenase, mitochondrial; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Involved in the cell stress response; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily (403 aa)
       
  0.862
PP1S23_50V6.1
Predicted protein (972 aa)
         
  0.835
PP1S65_267V6.1
Malate dehydrogenase (459 aa)
     
 
  0.831
PP1S48_151V6.2
Malate dehydrogenase (459 aa)
     
 
  0.831
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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