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STRINGSTRING
PP1S83_158V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S83_158V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S83_158V6.1Predicted protein (343 aa)    
Predicted Functional Partners:
PP1S5_30V6.1
Predicted protein (394 aa)
     
        0.885
PP1S22_50V6.1
Predicted protein (2742 aa)
           
  0.688
PP1S40_20V6.1
Predicted protein (478 aa)
           
  0.682
PP1S281_64V6.1
annotation not available (1302 aa)
         
  0.659
PP1S245_2V6.1
Predicted protein (338 aa)
   
        0.652
PP1S477_8V6.1
Predicted protein (357 aa)
   
        0.569
PP1S4_490V6.1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (362 aa)
     
        0.567
PP1S66_287V6.1
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX; Belongs to the Mg-chelatase subunits D/I family (779 aa)
     
        0.562
PP1S155_9V6.1
Predicted protein (186 aa)
     
        0.554
PP1S8_116V6.1
Predicted protein (617 aa)
     
        0.550
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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