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STRINGSTRING
PP1S83_180V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S83_180V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S83_180V6.1annotation not available (842 aa)    
Predicted Functional Partners:
PP1S104_30V6.1
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (186 aa)
   
 
  0.991
PP1S47_85V6.1
Predicted protein (595 aa)
     
 
  0.985
PP1S22_254V6.1
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (844 aa)
   
 
  0.983
PP1S100_74V6.1
Predicted protein (225 aa)
   
 
  0.983
PP1S294_14V6.1
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (434 aa)
     
 
  0.983
PP1S53_169V6.1
Predicted protein (312 aa)
     
 
  0.982
PP1S142_26V6.1
Predicted protein (491 aa)
     
 
  0.978
PP1S391_22V6.1
Predicted protein (347 aa)
     
 
  0.978
PP1S35_41V6.1
Predicted protein (351 aa)
     
 
  0.978
PP1S106_134V6.1
Predicted protein (329 aa)
     
 
  0.977
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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