• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S83_188V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S83_188V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S83_188V6.1annotation not available (262 aa)    
Predicted Functional Partners:
HEN1501
HEN1 protein (1021 aa)
           
  0.532
PP1S55_98V6.1
Predicted protein (201 aa)
           
  0.525
PP1S352_29V6.1
Predicted protein (212 aa)
           
  0.525
PP1S32_160V6.1
Predicted protein (201 aa)
           
  0.525
PP1S227_23V6.1
annotation not available (174 aa)
           
  0.525
PP1S134_37V6.1
annotation not available (1469 aa)
           
  0.524
PP1S478_8V6.1
Predicted protein (285 aa)
           
  0.510
PP1S169_100V6.1
Predicted protein (287 aa)
           
  0.510
PP1S11_74V6.1
Predicted protein (209 aa)
           
  0.510
PP1S98_45V6.1
Predicted protein (264 aa)
           
  0.502
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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