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STRINGSTRING
PP1S83_200V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S83_200V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S83_200V6.1Predicted protein (541 aa)    
Predicted Functional Partners:
PP1S455_4V6.2
Predicted protein (549 aa)
   
   
 
0.667
PP1S491_22V6.1
Predicted protein (550 aa)
   
   
 
0.665
PP1S121_25V6.1
Predicted protein (536 aa)
   
   
 
0.664
PP1S90_147V6.1
Predicted protein (552 aa)
   
   
 
0.658
PP1S83_207V6.1
Predicted protein (569 aa)
   
   
 
0.657
PP1S16_226V6.1
annotation not available (546 aa)
   
   
 
0.655
PP1S559_8V6.1
annotation not available (275 aa)
   
   
 
0.654
PP1S85_167V6.1
Predicted protein (546 aa)
         
 
0.650
PP1S63_52V6.3
Predicted protein (497 aa)
         
    0.650
PP1S540_7V6.1
Aspartate aminotransferase (473 aa)
         
    0.650
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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