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STRINGSTRING
PP1S83_53V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S83_53V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S83_53V6.1Predicted protein (323 aa)    
Predicted Functional Partners:
PP1S342_21V6.1
Predicted protein (416 aa)
           
  0.629
PP1S336_16V6.2
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family (597 aa)
   
   
  0.594
PP1S16_337V6.1
annotation not available (980 aa)
         
  0.575
PP1S114_83V6.1
Predicted protein (937 aa)
         
  0.575
PP1S166_51V6.1
Potassium transporter; Potassium transporter (937 aa)
           
  0.552
PP1S134_179V6.1
Potassium transporter; Potassium transporter (839 aa)
           
  0.552
PP1S74_90V6.1
Potassium transporter; Potassium transporter (804 aa)
           
  0.522
Pphak1
Potassium transporter; Potassium transporter (822 aa)
           
  0.522
PP1S143_149V6.2
Predicted protein (514 aa)
     
   
  0.521
PP1S142_149V6.1
Predicted protein (524 aa)
     
   
  0.521
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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