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STRINGSTRING
PP1S83_66V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S83_66V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S83_66V6.1Predicted protein (359 aa)    
Predicted Functional Partners:
PP1S31_53V6.2
Predicted protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family (370 aa)
     
   
  0.997
PP1S158_146V6.1
Predicted protein (347 aa)
         
  0.906
PP1S107_60V6.1
Predicted protein (269 aa)
         
  0.906
PP1S47_21V6.1
Predicted protein (358 aa)
     
   
  0.839
PP1S13_392V6.1
Predicted protein (368 aa)
     
   
  0.839
PP1S66_138V6.1
Predicted protein (415 aa)
 
   
  0.828
PP1S50_49V6.1
Predicted protein (381 aa)
     
   
  0.822
PP1S77_205V6.1
annotation not available (401 aa)
   
   
  0.807
PP1S3_324V6.1
Predicted protein (497 aa)
   
   
  0.807
PP1S31_108V6.2
Predicted protein (415 aa)
   
   
  0.807
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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